Basic Information
Locus ID:
Zosma05g25390.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 26351141 | 26355859 | - | Zosma05g25390.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 57,446.70 Da | 46.08 | 74.55 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 45 | 506 | 1.68E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 88 | 509 | 3.2E-27 | IPR015943 |
| SMART | SM00320 | WD40_4 | 471 | 509 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 258 | 1.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 269 | 309 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 37 | 72 | 4.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 369 | 423 | 380.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 110 | 150 | 1.5 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 17 | 510 | 2.6E-193 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 110 | 124 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 51 | 71 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 396 | 422 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 230 | 257 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 370 | 395 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 286 | 314 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 126 | 154 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 342 | 369 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 258 | 285 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 97 | 125 | 4.7E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 479 | 508 | 4.7E-142 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 454 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.1 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_014516492.1 | - | 0 |
| A2X2K3 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P9J0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology