Basic Information
Locus ID:
Zosma05g16800.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Domain of unknown function (DUF4216)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 15126591 | 15128741 | - | Zosma05g16800.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 64,906.11 Da | 35.26 | 68.63 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 373 | 519 | 3.0E-7 | IPR004252 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 101 | 172 | 2.5E-12 | IPR025312 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 490 | - | - |
| Coils | Coil | Coil | 443 | 463 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045809328.1 | uncharacterized protein LOC123903770 [Trifolium pratense] | 0 |
| TrEMBL | A0A2K3MKR6 | DUF4216 domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g047496 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag8G00744 |
| Posidoniaceae | Posidonia oceanica | 12 | gene.Posoc01g25390, gene.Posoc01g25950, gene.Posoc01g29540 ... |
| Zosteraceae | Zostera marina | 6 | Zosma02g07610.v3.1, Zosma02g07810.v3.1, Zosma04g11340.v3.1 ... |