HalophFGD

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Basic Information
Locus ID: Zosma05g16700.v3.1
Species & Taxonomic ID: Zostera marina & 29655
Genome Assembly: GCA_001185155.1
Description: AN1-like Zinc finger
Maps and Mapping Data
Chromosome Start End Strand ID
Chr05 14501597 14501932 - Zosma05g16700.v3.1
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.87 12,434.03 Da 46.03 76.31 -0.45
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF01754 A20-like zinc finger 6 26 8.1E-6 IPR002653
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain) 6 43 2.14E-7 -
Gene3D G3DSA:1.20.5.4770 - 1 49 2.1E-11 -
Gene Ontology
Molecular Function:
GO:0003677 (DNA binding) GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A0K9PC90 - 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_13305
Zosteraceae Zostera marina 5 Zosma05g16690.v3.1, Zosma05g16700.v3.1, Zosma05g16720.v3.1 ...
Zosma06g13620.v3.1, Zosma664g00020.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.