Basic Information
Locus ID:
Zosma05g13460.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 8772729 | 8774120 | - | Zosma05g13460.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 31,806.44 Da | 41.84 | 67.02 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 34 | 286 | 4.0E-69 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 195 | 276 | 7.36E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 191 | 289 | 8.2E-40 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 195 | 277 | 26.865517 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_009421456.1 | PREDICTED: auxin-responsive protein IAA21-like [Musa acuminata subsp. malaccensis] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PZS1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology