HalophFGD

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Basic Information
Locus ID: Zosma05g13280.v3.1
Species & Taxonomic ID: Zostera marina & 29655
Genome Assembly: GCA_001185155.1
Description: F-box protein At5g49610-like
Maps and Mapping Data
Chromosome Start End Strand ID
Chr05 8645773 8646897 + Zosma05g13280.v3.1
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.63 44,287.25 Da 38.50 84.33 -0.26
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 8 67 3.92E-6 IPR036047
ProSiteProfiles PS50181 F-box domain profile. 3 46 8.702637 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_004502370.1 - 0
TrEMBL A0A0K9PZE4 - 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 2 COCNU_05G001850, COCNU_05G001860
Arecaceae Phoenix dactylifera 1 gene-LOC103716347
Hydrocharitaceae Thalassia testudinum 3 gene.Thate05g23740, gene.Thate05g29380, gene.Thate07g07020
Posidoniaceae Posidonia oceanica 11 gene.Posoc02g16770, gene.Posoc02g16780, gene.Posoc02g16800 ...
gene.Posoc02g16810, gene.Posoc02g16820, gene.Posoc02g16830, gene.Posoc02g16840, gene.Posoc02g16850, gene.Posoc03g15790, gene.Posoc05g04330, gene.Posoc10g05900
Zosteraceae Zostera marina 9 Zosma05g13040.v3.1, Zosma05g13280.v3.1, Zosma05g15120.v3.1 ...
Zosma05g16390.v3.1, Zosma05g16420.v3.1, Zosma05g16440.v3.1, Zosma05g16450.v3.1, Zosma05g24840.v3.1, Zosma798g00010.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.