Basic Information
Locus ID:
Zosma05g13070.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Short Name:
NTMC2T2.1
Description:
C2 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 8441664 | 8443470 | - | Zosma05g13070.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 43,272.33 Da | 14.71 | 96.41 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00030 | C2 | 79 | 181 | 2.48061E-27 | - |
| CDD | cd00030 | C2 | 261 | 361 | 1.93184E-26 | - |
| Pfam | PF00168 | C2 domain | 77 | 181 | 1.5E-23 | IPR000008 |
| Pfam | PF00168 | C2 domain | 259 | 361 | 1.4E-26 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 258 | 376 | 3.84E-32 | IPR035892 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 75 | 204 | 4.84E-32 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 73 | 215 | 1.1E-32 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 248 | 377 | 4.3E-35 | IPR035892 |
| SMART | SM00239 | C2_3c | 78 | 178 | 1.1E-23 | IPR000008 |
| SMART | SM00239 | C2_3c | 260 | 358 | 1.9E-23 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 58 | 179 | 20.875397 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 241 | 359 | 21.010328 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 324 | 332 | 2.6E-6 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 302 | 315 | 2.6E-6 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 276 | 288 | 2.6E-6 | IPR000008 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05500.2 | - | 0 |
| RefSeq | XP_026660235.2 | - | 0 |
| Q8L706 | Synaptotagmin-5 OS=Arabidopsis thaliana OX=3702 GN=SYT5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NJQ8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology