Basic Information
Locus ID:
Zosma05g12630.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 7840637 | 7843821 | + | Zosma05g12630.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 110,053.71 Da | 31.71 | 105.29 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 117 | 130 | 0.49 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 4.6E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 144 | 163 | 1.1 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 702 | 915 | 3.4E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 688 | 978 | 6.34E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 276 | 1.26E-51 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 223 | 586 | 1.65E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 356 | 451 | 1.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 683 | 781 | 4.7E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 355 | 5.4E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 525 | 608 | 4.0E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 992 | 8.4E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 452 | 524 | 1.0E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 204 | 6.8E-47 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 37.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 700 | 967 | 3.9E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 92 | 117 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 238 | 262 | 100.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 994 | 36.47068 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 706 | 728 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010260335.1 | PREDICTED: receptor-like protein kinase HSL1 [Nelumbo nucifera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PX31 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology