Basic Information
Locus ID:
Zosma05g08000.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 4922570 | 4924681 | + | Zosma05g08000.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 58,758.44 Da | 43.52 | 77.81 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 251 | 293 | 2.1E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 251 | 296 | 4.91E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 292 | 355 | 4.71E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 249 | 291 | 5.4E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 409 | 2.2E-8 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_006438126.1 | F-box protein SKIP14 [Citrus clementina] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P0Y1 | F-box domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_4G01920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology