Basic Information
Locus ID:
Zosma05g06380.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Ubiquitin-like modifier-activating enzyme ATG7 N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 4043666 | 4048327 | + | Zosma05g06380.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 78,900.53 Da | 42.44 | 89.48 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01486 | Apg7 | 357 | 682 | 0.0 | - |
| Pfam | PF16420 | Ubiquitin-like modifier-activating enzyme ATG7 N-terminus | 9 | 323 | 3.5E-82 | IPR032197 |
| Pfam | PF00899 | ThiF family | 348 | 603 | 2.6E-40 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 348 | 676 | 4.05E-43 | IPR035985 |
| Gene3D | G3DSA:3.40.140.100 | - | 8 | 289 | 3.0E-103 | IPR042523 |
| Gene3D | G3DSA:3.40.50.720 | - | 323 | 706 | 7.4E-138 | - |
| Gene3D | G3DSA:3.40.140.70 | - | 13 | 319 | 3.0E-103 | IPR042522 |
| TIGRFAM | TIGR01381 | E1_like_apg7: E1-like protein-activating enzyme Gsa7p/Apg7p | 10 | 705 | 2.4E-254 | IPR006285 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45900.1 | ThiF family protein. Component of autophagy conjugation pathway. Required for proper senescence. | 0 |
| RefSeq | XP_010924881.1 | ubiquitin-like modifier-activating enzyme atg7 [Elaeis guineensis] | 0 |
| Q94CD5 | Ubiquitin-like modifier-activating enzyme atg7 OS=Arabidopsis thaliana OX=3702 GN=ATG7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NUN2 | Ubiquitin-like modifier-activating enzyme ATG7 OS=Zostera marina OX=29655 GN=ZOSMA_65G00960 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20629 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_408, gene_409, gene_411 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah017109 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g181770 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40439, Sbi_jg50454 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2028 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026971 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl45402, Sgl45405, Sgl50195 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010878, gene:ENSEOMG00000033205 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0006790, CQ.Regalona.r1.8BG0007220 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30072400 |
| Apiaceae | Apium graveolens | 2 | Ag8G00855, Ag8G01950 |
| Arecaceae | Cocos nucifera | 1 | COCNU_14G001510 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708313 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2942.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G09706 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G45900.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000804m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g10820.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB04g011360.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1299 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1341 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g01450 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0034s00028.v1.0, Dusal.0034s00029.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g14870 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-925 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.833 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005604 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.2327, BH02.2433, CH02.2610 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0024510, gene-QOZ80_1BG0075130 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0271550.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_053783, gene-QYE76_053784, gene-QYE76_053800 ... |
| Poaceae | Oryza coarctata | 2 | Oco01G014510, Oco02G014830 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g42850.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G194500 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0104572, Pt_Chr0104609, Pt_Chr0603327 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G015450, Chr03G011070, Chr05G018360, Chr08G011240 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G532700, Tel3E01G378500 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG043750, gene_TRIDC2BG046430 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS2D02G300300.1, TraesCS3A02G220600.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb358160_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-29249 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g8215 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.1403, evm.TU.LG20.482 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g09440 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.311 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-30787 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2448 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20999 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000015l.191 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015627 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5905 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16820 |
| Salicaceae | Populus euphratica | 3 | populus_peu09955, populus_peu18054, populus_peu18071 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132600637 |
| Solanaceae | Solanum chilense | 1 | SOLCI006290700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005159 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_6551 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G1440 |
| Zosteraceae | Zostera marina | 1 | Zosma05g06380.v3.1 |