Basic Information
Locus ID:
Zosma05g04030.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 2199643 | 2202514 | + | Zosma05g04030.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 81,903.72 Da | 48.60 | 77.92 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 146 | 379 | 4.2E-65 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 420 | 650 | 1.9E-68 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 157 | 653 | 8.8E-199 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 438 | 614 | 8.8E-199 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 292 | 326 | 8.70333 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 114 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_038985018.1 | - | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NW37 | ribonuclease P OS=Zostera marina OX=29655 GN=ZOSMA_5G00210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology