Basic Information
Locus ID:
Zosma05g01890.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 999571 | 1002421 | - | Zosma05g01890.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 103,030.76 Da | 38.30 | 90.72 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 580 | 849 | 3.25026E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 577 | 852 | 5.7E-49 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 84 | 9.7E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 366 | 382 | 1.2 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 559 | 854 | 1.62E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 452 | 9.35E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 347 | 469 | 5.2E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 654 | 871 | 1.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 344 | 1.6E-67 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 539 | 653 | 1.7E-32 | - |
| SMART | SM00220 | serkin_6 | 574 | 859 | 1.4E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 432 | 454 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 133 | 156 | 0.061 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 574 | 859 | 42.265621 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 580 | 602 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 703 | 715 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017219313.1 | PREDICTED: receptor-like kinase TMK4 [Daucus carota subsp. sativus] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NUC1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology