Basic Information
Locus ID:
Zosma05g01740.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 958195 | 959358 | + | Zosma05g01740.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 43,302.35 Da | 53.30 | 77.31 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 49 | 4.1E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 153 | 198 | 5.7E-15 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 61 | 2.35E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 369 | 8.89E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 26 | 375 | 1.8E-34 | IPR015915 |
| SMART | SM00612 | kelc_smart | 116 | 164 | 0.091 | IPR006652 |
| SMART | SM00612 | kelc_smart | 165 | 212 | 1.8E-10 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_009405095.1 | PREDICTED: F-box/kelch-repeat protein SKIP20-like [Musa acuminata subsp. malaccensis] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NUD8 | Kelch repeat-containing F-box family protein OS=Zostera marina OX=29655 GN=ZOSMA_5G02670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology