Basic Information
Locus ID:
Zosma04g25310.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
protein DEHYDRATION-INDUCED 19 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 33077114 | 33082447 | - | Zosma04g25310.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 45,532.12 Da | 49.25 | 71.83 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00266 | MADS_SRF_like | 217 | 303 | 1.13199E-17 | IPR033897 |
| Pfam | PF14571 | Stress-induced protein Di19, C-terminal | 109 | 199 | 1.0E-15 | IPR027935 |
| Pfam | PF00319 | SRF-type transcription factor (DNA-binding and dimerisation domain) | 228 | 265 | 1.8E-11 | IPR002100 |
| Pfam | PF05605 | Drought induced 19 protein (Di19), zinc-binding | 44 | 75 | 6.2E-8 | IPR008598 |
| SUPERFAMILY | SSF55455 | SRF-like | 216 | 300 | 5.76E-16 | IPR036879 |
| Gene3D | G3DSA:3.40.1810.10 | - | 235 | 315 | 3.7E-12 | IPR036879 |
| SMART | SM00432 | madsneu2 | 216 | 277 | 2.1E-8 | IPR002100 |
| ProSiteProfiles | PS50066 | MADS-box domain profile. | 216 | 262 | 14.422982 | IPR002100 |
| PRINTS | PR00404 | MADS domain signature | 238 | 253 | 6.8E-5 | IPR002100 |
| PRINTS | PR00404 | MADS domain signature | 218 | 238 | 6.8E-5 | IPR002100 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 399 | - | - |
| Coils | Coil | Coil | 312 | 332 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05700.2 | - | 0 |
| RefSeq | XP_010914520.1 | - | 0 |
| Q84J70 | Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=DI19-3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P6X4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology