Basic Information
Locus ID:
Zosma04g24060.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 32160058 | 32163004 | - | Zosma04g24060.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 71,041.25 Da | 46.99 | 74.58 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 100 | 320 | 5.1E-73 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 361 | 588 | 2.9E-70 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 379 | 553 | 7.3E-223 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 108 | 591 | 7.3E-223 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 198 | 232 | 9.13082 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 66 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_043719715.1 | - | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PZC3 | ribonuclease P OS=Zostera marina OX=29655 GN=ZOSMA_146G00650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology