Basic Information
Locus ID:
Zosma04g10760.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 12455048 | 12456436 | - | Zosma04g10760.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 37,262.35 Da | 31.34 | 77.62 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 161 | 220 | 2.67058E-16 | IPR002048 |
| CDD | cd00051 | EFh | 231 | 293 | 9.43062E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 10 | 112 | 1.4E-26 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 158 | 219 | 1.6E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 230 | 293 | 1.3E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 120 | 2.38E-33 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 141 | 294 | 2.82E-39 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 126 | 297 | 1.2E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 4 | 119 | 4.1E-35 | - |
| SMART | SM00054 | efh_1 | 159 | 187 | 8.5E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 267 | 295 | 9.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 231 | 259 | 2.3 | IPR002048 |
| SMART | SM00220 | serkin_6 | 2 | 112 | 3.5E-6 | IPR000719 |
| SMART | SM00054 | efh_1 | 195 | 223 | 0.95 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 263 | 298 | 12.839682 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 155 | 190 | 16.410292 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 112 | 19.552282 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 191 | 226 | 8.515894 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 227 | 262 | 11.138062 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 276 | 288 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 240 | 252 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 168 | 180 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_022994598.1 | - | 0 |
| Q9SSF8 | Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CPK30 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NJP2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology