Basic Information
Locus ID:
Zosma04g10100.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 10529008 | 10530906 | - | Zosma04g10100.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 25,717.79 Da | 37.49 | 95.59 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 12 | 122 | 9.04898E-32 | IPR000608 |
| Pfam | PF00808 | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 153 | 200 | 1.3E-4 | IPR003958 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 12 | 140 | 2.5E-25 | IPR000608 |
| SUPERFAMILY | SSF47113 | Histone-fold | 142 | 203 | 8.78E-7 | IPR009072 |
| SUPERFAMILY | SSF54495 | UBC-like | 9 | 125 | 2.75E-28 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 8 | 124 | 1.1E-28 | IPR016135 |
| Gene3D | G3DSA:1.10.20.10 | Histone, subunit A | 125 | 211 | 2.4E-14 | IPR009072 |
| SMART | SM00212 | ubc_7 | 11 | 159 | 2.2E-19 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 8 | 166 | 29.05151 | IPR000608 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G45050.1 | Ubiquitin-conjugating enzyme family protein. member of ubiquitin-conjugating E2-proteins | 0 |
| RefSeq | XP_038714920.1 | - | 0 |
| P42743 | Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana OX=3702 GN=UBC15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P4E5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 2 | Zosma04g10050.v3.1, Zosma04g10100.v3.1 |