Basic Information
Locus ID:
Zosma04g08010.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 6428685 | 6431229 | - | Zosma04g08010.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 66,091.51 Da | 39.64 | 91.46 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 124 | 1.03984E-45 | - |
| Pfam | PF03000 | NPH3 family | 210 | 453 | 2.7E-89 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 28 | 116 | 1.0E-5 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 116 | 1.41E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 17 | 120 | 6.9E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 477 | 90.204483 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 9.640858 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 558 | 602 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 602 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_010907392.1 | BTB/POZ domain-containing protein NPY4 isoform X1 [Elaeis guineensis] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PAU9 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology