Basic Information
Locus ID:
Zosma04g05220.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 4027450 | 4027962 | - | Zosma04g05220.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.34 | 19,050.20 Da | 29.18 | 89.00 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 90 | 151 | 2.56708E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 14 | 72 | 6.9E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 88 | 151 | 4.9E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 11 | 152 | 3.57E-39 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 158 | 4.6E-41 | - |
| SMART | SM00054 | efh_1 | 126 | 154 | 1.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 50 | 78 | 1.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 90 | 118 | 3.9E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 14 | 42 | 8.4E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 46 | 81 | 10.161722 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 86 | 121 | 15.936071 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 122 | 157 | 12.42125 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 10 | 45 | 13.258112 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 135 | 147 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 99 | 111 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 23 | 35 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 59 | 71 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_020572020.1 | - | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NRY0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology