Basic Information
Locus ID:
Zosma04g04970.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 3842084 | 3843510 | - | Zosma04g04970.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 48,149.07 Da | 35.57 | 86.47 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 91 | 433 | 1.05749E-78 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 285 | 429 | 1.6E-23 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 92 | 264 | 1.0E-48 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 86 | 433 | 2.82E-80 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 268 | 436 | 1.6E-34 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 74 | 265 | 5.3E-50 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 92 | 429 | 40.414326 | IPR033121 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 405 | 420 | 8.6E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 98 | 118 | 8.6E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 307 | 318 | 8.6E-6 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | NP_198319.1 | - | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PWP4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology