Basic Information
Locus ID:
Zosma04g03980.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 3155346 | 3165726 | - | Zosma04g03980.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 118,798.99 Da | 34.57 | 89.63 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 715 | 984 | 1.10609E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 712 | 979 | 1.6E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 349 | 367 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 325 | 342 | 0.87 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 205 | 227 | 0.67 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 253 | 275 | 1.6 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 457 | 632 | 4.2E-21 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 695 | 1002 | 8.09E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 99 | 427 | 3.74E-56 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 455 | 637 | 1.9E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 454 | 1.4E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 990 | 1.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 679 | 784 | 5.2E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 62 | 222 | 2.0E-32 | IPR032675 |
| SMART | SM00220 | serkin_6 | 709 | 982 | 1.4E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 709 | 988 | 36.2304 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 715 | 738 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 830 | 842 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1031 | 1056 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.3 | - | 0 |
| RefSeq | XP_024019153.1 | - | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9Q141 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology