Basic Information
Locus ID:
Zosma04g01490.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 1177005 | 1186984 | - | Zosma04g01490.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 108,945.65 Da | 46.06 | 86.74 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 783 | 937 | 1.6187E-58 | - |
| Pfam | PF06337 | DUSP domain | 36 | 143 | 1.4E-20 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 338 | 936 | 1.4E-86 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 336 | 939 | 6.67E-107 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 14 | 143 | 3.14E-25 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 324 | 566 | 1.7E-66 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 8 | 156 | 2.6E-33 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 621 | 946 | 2.9E-57 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 157 | 237 | 2.3E-8 | - |
| SMART | SM00695 | dusp | 32 | 146 | 7.0E-24 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 13 | 143 | 17.625086 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 338 | 939 | 56.640312 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 881 | 898 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 339 | 354 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_010929801.1 | ubiquitin carboxyl-terminal hydrolase 5 [Elaeis guineensis] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9P215 | Ubiquitin carboxyl-terminal hydrolase OS=Zostera marina OX=29655 GN=ZOSMA_42G00600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology