Basic Information
Locus ID:
Zosma03g35630.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 38896299 | 38898798 | + | Zosma03g35630.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 54,819.79 Da | 46.46 | 90.51 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 373 | 443 | 1.3E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 36 | 356 | 2.0E-82 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 36 | 356 | 2.2E-83 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 35 | 361 | 7.1E-113 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 366 | 459 | 4.6E-10 | - |
| SMART | SM00768 | X8_cls | 372 | 457 | 4.6E-47 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_039114553.1 | glucan endo-1,3-beta-glucosidase 3-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P8J0 | Beta-1,3-endoglucanase, family GH17 OS=Zostera marina OX=29655 GN=ZOSMA_32G00790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology