Basic Information
Locus ID:
Zosma03g35560.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 38849673 | 38856318 | + | Zosma03g35560.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 180,378.83 Da | 44.79 | 78.21 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 318 | 588 | 4.28695E-112 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1316 | 1580 | 8.32859E-134 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1355 | 1522 | 6.2E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 336 | 585 | 1.6E-31 | IPR002423 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 39 | 111 | 1.04E-5 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 383 | 554 | 1.83E-37 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1295 | 1581 | 1.92E-81 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 382 | 554 | 4.2E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1270 | 1436 | 1.9E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1439 | 1581 | 6.5E-42 | - |
| SMART | SM00330 | PIPK_2 | 1289 | 1581 | 4.3E-116 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 43 | 99 | 9.249657 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1257 | 1580 | 61.405266 | IPR002498 |
| Coils | Coil | Coil | 963 | 983 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_008801162.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Phoenix dactylifera] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P8C7 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Zostera marina OX=29655 GN=ZOSMA_32G00730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology