Basic Information
Locus ID:
Zosma03g31780.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 36658651 | 36660964 | + | Zosma03g31780.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 78,313.52 Da | 36.12 | 89.14 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 48 | 141 | 4.0E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 167 | 253 | 7.6E-11 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 632 | 4.7E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 651 | 3.05E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 153 | 257 | 9.4E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 40 | 143 | 2.0E-24 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 440 | 641 | 9.7E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 439 | 7.3E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 638 | 28.004414 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 150 | 257 | 15.728474 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 41 | 143 | 19.666138 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_020106069.1 | - | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9NPU1 | Receptor-like protein kinase, putative,expressed OS=Zostera marina OX=29655 GN=ZOSMA_75G00360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno13g00600, gene.Cymno17g06150 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g29460 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g01480 |
| Zosteraceae | Zostera marina | 1 | Zosma03g31780.v3.1 |