Basic Information
Locus ID:
Zosma03g29380.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
protein catabolic process in the vacuole
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 35479063 | 35479797 | + | Zosma03g29380.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 23,950.02 Da | 46.86 | 73.10 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 122 | 207 | 5.2E-12 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 18 | 64 | 1.11E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 122 | 209 | 1.64E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 215 | 2.3E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 12 | 75 | 3.6E-9 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 216 | 12.273273 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 131 | 143 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_009416157.2 | PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Musa acuminata subsp. malaccensis] | 0 |
| O80939 | L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK41 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NT08 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah036118 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g209520 |
| Apiaceae | Apium graveolens | 1 | Ag11G03669 |
| Brassicaceae | Brassica nigra | 1 | BniB04g047740.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0774 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013418 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0055280 |
| Poaceae | Oryza coarctata | 1 | Oco03G010770 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g13330.1 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG005730, gene_TRIDC6AG044300 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS5D02G077200.2 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7939 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2877 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-7737, nbisL1-mrna-9073 |
| Salicaceae | Populus euphratica | 1 | populus_peu32284 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5484 |
| Zosteraceae | Zostera marina | 1 | Zosma03g29380.v3.1 |