Basic Information
Locus ID:
Zosma03g28530.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
NAC domain transcription factor superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 35099709 | 35102170 | - | Zosma03g28530.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 64,719.89 Da | 47.77 | 78.47 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 64 | 203 | 1.6E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 48 | 221 | 1.83E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 72 | 224 | 2.0E-29 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 63 | 221 | 30.867336 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_008800750.2 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Phoenix dactylifera] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PZ82 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology