Basic Information
Locus ID:
Zosma03g27640.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 34575306 | 34599856 | - | Zosma03g27640.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 101,407.67 Da | 40.86 | 85.29 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 725 | 877 | 3.40436E-56 | - |
| Pfam | PF06337 | DUSP domain | 41 | 141 | 1.1E-22 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 298 | 876 | 3.5E-82 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 141 | 6.54E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 296 | 879 | 2.35E-109 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 10 | 156 | 7.5E-31 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 701 | 885 | 8.9E-55 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 283 | 518 | 2.5E-67 | - |
| SMART | SM00695 | dusp | 37 | 144 | 2.7E-23 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 298 | 879 | 56.583088 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 141 | 19.084759 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 299 | 314 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 821 | 838 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_010908130.1 | ubiquitin carboxyl-terminal hydrolase 9 [Elaeis guineensis] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P3D1 | Ubiquitin carboxyl-terminal hydrolase OS=Zostera marina OX=29655 GN=ZOSMA_44G01270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology