Basic Information
Locus ID:
Zosma03g27400.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 34379488 | 34383614 | + | Zosma03g27400.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 125,422.04 Da | 45.43 | 71.53 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 151 | 244 | 2.46141E-43 | - |
| CDD | cd13999 | STKc_MAP3K-like | 839 | 1096 | 4.67991E-112 | - |
| Pfam | PF00564 | PB1 domain | 162 | 245 | 6.2E-18 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 835 | 1095 | 1.9E-64 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 161 | 249 | 1.69E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 824 | 1094 | 1.78E-75 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 166 | 266 | 2.6E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 826 | 920 | 9.1E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 921 | 1118 | 1.5E-52 | - |
| SMART | SM00666 | PB1_new | 160 | 247 | 2.1E-27 | IPR000270 |
| SMART | SM00220 | serkin_6 | 833 | 1100 | 1.8E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 833 | 1103 | 40.739147 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 958 | 970 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 839 | 860 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1067 | 1089 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1023 | 1045 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 952 | 970 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 915 | 928 | 1.5E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1100 | 1119 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_008789506.2 | uncharacterized protein LOC103706982 isoform X1 [Phoenix dactylifera] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NYB8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology