Basic Information
Locus ID:
Zosma03g27260.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 34283598 | 34289586 | + | Zosma03g27260.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 83,713.99 Da | 34.59 | 97.08 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 141 | 155 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 166 | 225 | 2.6E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 463 | 733 | 1.4E-43 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 120 | 134 | 0.88 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 52 | 93 | 3.1E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 274 | 3.6E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 442 | 734 | 8.03E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 538 | 752 | 8.7E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 51 | 294 | 1.7E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 427 | 537 | 1.5E-29 | - |
| SMART | SM00369 | LRR_typ_2 | 212 | 234 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 6.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 146 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 211 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 737 | 36.809895 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 414 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_020672603.1 | - | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NY00 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology