Basic Information
Locus ID:
Zosma03g27210.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 34268038 | 34269139 | - | Zosma03g27210.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 34,959.32 Da | 46.04 | 82.13 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 104 | 301 | 3.3E-18 | IPR025886 |
| Pfam | PF00646 | F-box domain | 12 | 55 | 5.6E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 84 | 1.11E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 85 | 2.9E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 9.656436 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02240.1 | F-box family protein. | 0 |
| RefSeq | XP_020540303.2 | - | 0 |
| Q3E6P4 | F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NZN8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 7 | Zosma01g02930.v3.1, Zosma01g06210.v3.1, Zosma01g10120.v3.1 ... |