Basic Information
Locus ID:
Zosma03g26250.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 33442341 | 33448772 | - | Zosma03g26250.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 40,856.64 Da | 43.03 | 81.30 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03114 | BAR domain | 54 | 254 | 6.1E-7 | IPR004148 |
| Pfam | PF00018 | SH3 domain | 305 | 346 | 3.2E-9 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 254 | 3.14E-26 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 284 | 356 | 8.53E-16 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 41 | 299 | 1.9E-13 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 300 | 352 | 4.0E-15 | - |
| SMART | SM00326 | SH3_2 | 298 | 353 | 1.9E-11 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 295 | 354 | 18.965584 | IPR001452 |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 320 | 336 | 2.3E-5 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 300 | 320 | 2.3E-5 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 336 | 349 | 2.3E-5 | - |
| Coils | Coil | Coil | 145 | 165 | - | - |
| Coils | Coil | Coil | 182 | 209 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_020277352.1 | SH3 domain-containing protein 2 [Asparagus officinalis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NNK4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology