Basic Information
Locus ID:
Zosma03g25280.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 32770611 | 32774417 | - | Zosma03g25280.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 78,419.49 Da | 28.53 | 89.96 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 4.8E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 412 | 683 | 5.3E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 174 | 2.5E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 683 | 6.42E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 235 | 9.52E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 487 | 3.6E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 705 | 1.1E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 245 | 1.7E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 187 | 209 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 186 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 121 | 350.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 686 | 35.919453 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 189 | 211 | 7.1113 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 269 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_010273793.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Nelumbo nucifera] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NNS9 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Zostera marina OX=29655 GN=ZOSMA_84G00480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology