halophFGD

Basic Information

Locus ID: Zosma03g24130.v3.1

Species & Taxonomic ID: Zostera marina & 29655

Genome Assembly: GCA_001185155.1

Description: Regulatory protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr03	31953552	31955420	-	Zosma03g24130.v3.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.21	64,886.50 Da	43.95	91.71	-0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00651	BTB/POZ domain	64	158	1.5E-8	IPR000210
Pfam	PF13637	Ankyrin repeats (many copies)	313	357	2.0E-5	-
Pfam	PF12313	NPR1/NIM1 like defence protein C terminal	385	569	5.4E-54	IPR021094
SUPERFAMILY	SSF54695	POZ domain	64	156	7.32E-12	IPR011333
SUPERFAMILY	SSF48403	Ankyrin repeat	284	386	2.64E-16	IPR036770
Gene3D	G3DSA:1.25.40.20	-	279	417	2.9E-18	IPR036770
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	48	242	9.5E-19	IPR011333
SMART	SM00225	BTB_4	66	209	3.0E-13	IPR000210
SMART	SM00248	ANK_2a	309	339	1.2	IPR002110
SMART	SM00248	ANK_2a	343	372	0.86	IPR002110
SMART	SM00248	ANK_2a	280	308	4100.0	IPR002110
ProSiteProfiles	PS50088	Ankyrin repeat profile.	343	375	9.80474	IPR002110
ProSiteProfiles	PS50097	BTB domain profile.	66	159	14.211579	IPR000210
ProSiteProfiles	PS50297	Ankyrin repeat region circular profile.	343	369	8.932349	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	28	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K14508 (regulatory protein NPR1)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G45110.1	NPR1-like protein 3. Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.
RefSeq	XP_028062623.1	-
Swiss-Prot	E7BQV0	BTB/POZ domain and ankyrin repeat-containing protein NPR1 OS=Malus hupehensis OX=106556 GN=NPR1 PE=2 SV=2
TrEMBL	A0A0K9Q6A3	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg20876, jg24099, jg32913, jg37460
Aizoaceae	Mesembryanthemum crystallinum	1	gene_9359
Amaranthaceae	Atriplex hortensis	1	Ah015177
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg24590, Sbi_jg8451
Amaranthaceae	Salicornia europaea	1	Seu_jg28716
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00014746
Amaranthaceae	Suaeda glauca	2	Sgl41783, Sgl46585
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000011052, gene:ENSEOMG00000034168 ... gene:ENSEOMG00000046682
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.8AG0014830, CQ.Regalona.r1.8BG0016030
Anacardiaceae	Pistacia vera	4	pistato.v30013180, pistato.v30078240, pistato.v30108090 ... pistato.v30259540
Apiaceae	Apium graveolens	4	Ag10G01441, Ag6G01202, Ag7G01075, Ag9G02479
Arecaceae	Cocos nucifera	5	COCNU_02G001470, COCNU_03G015070, COCNU_06G018980 ... COCNU_14G001050, COCNU_14G009440
Arecaceae	Phoenix dactylifera	5	gene-LOC103702021, gene-LOC103705401, gene-LOC103719294 ... gene-LOC103719594, gene-LOC113461809
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.2375.V1.1, AsparagusV1_07.3159.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G10356, Ftri18G17771, Ftri1G03889, Ftri8G26191
Brassicaceae	Arabidopsis thaliana	4	AT1G64280.1, AT4G19660.1, AT4G26120.1, AT5G45110.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10000824m.g.v1.0, Thhalv10023365m.g.v1.0 ... Thhalv10024745m.g.v1.0, Thhalv10024746m.g.v1.0, Thhalv10024752m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp2g00470.v2.2, Sp2g09920.v2.2, Sp7g18230.v2.2 ... Sp7g24140.v2.2
Brassicaceae	Brassica nigra	7	BniB02g062170.2N, BniB03g012550.2N, BniB04g012090.2N ... BniB04g023400.2N, BniB05g011310.2N, BniB05g011320.2N, BniB05g016760.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1445, Ceq02G2177, Ceq06G0842
Casuarinaceae	Casuarina glauca	3	Cgl02G1490, Cgl02G2254, Cgl06G0867
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g11640, gene.Cymno06g03730, gene.Cymno13g03260
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate02g24240, gene.Thate02g24260, gene.Thate04g03600 ... gene.Thate05g20560
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-4692, nbisL1-mrna-5499
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG04.2266, evm.TU.LG07.1255, evm.TU.LG12.195 ... evm.TU.LG12.196, evm.TU.LG12.197
Plantaginaceae	Plantago ovata	3	Pov_00002953, Pov_00031763, Pov_00038621
Plumbaginaceae	Limonium bicolor	1	Lb2G14534
Poaceae	Echinochloa crus-galli	9	AH01.1393, AH02.314, AH02.3395, BH01.1258, BH02.342 ... BH02.3571, CH01.1308, CH02.3099, CH02.379
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_1AG0013110, gene-QOZ80_1AG0034640 ... gene-QOZ80_1BG0061860, gene-QOZ80_1BG0084750, gene-QOZ80_3AG0222500, gene-QOZ80_3AG0222510, gene-QOZ80_3BG0267510, gene-QOZ80_3BG0267520
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.3HG0236240.1, HORVU.MOREX.r3.3HG0291620.1 ... HORVU.MOREX.r3.4HG0333690.1
Poaceae	Lolium multiflorum	3	gene-QYE76_050132, gene-QYE76_055455, gene-QYE76_063196
Poaceae	Oryza coarctata	6	Oco01G004120, Oco01G021250, Oco02G004140, Oco02G021840 ... Oco05G019720, Oco06G020580
Poaceae	Oryza sativa	3	LOC_Os01g09800.1, LOC_Os01g56200.1, LOC_Os03g46440.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G132500, gene-BS78_03G030700 ... gene-BS78_03G288600
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0205292, Pt_Chr0602092, Pt_Chr0602113, Pt_Chr0602542
Poaceae	Sporobolus alterniflorus	10	Chr01G008640, Chr02G008560, Chr02G021010, Chr03G006430 ... Chr05G011760, Chr05G024930, Chr07G024440, Chr08G006810, Chr12G028560, Chr12G028580
Poaceae	Thinopyrum elongatum	7	Tel1E01G515200, Tel3E01G183200, Tel3E01G183400 ... Tel3E01G493300, Tel4E01G041400, Tel7E01G047500, Tel7E01G048700
Poaceae	Triticum dicoccoides	7	gene_TRIDC3AG012960, gene_TRIDC3AG044830 ... gene_TRIDC3BG017420, gene_TRIDC3BG050750, gene_TRIDC4AG045270, gene_TRIDC4BG003310, gene_TRIDC7AG001960
Poaceae	Triticum aestivum	11	TraesCS3A02G105400.1, TraesCS3A02G298800.1 ... TraesCS3B02G123800.1, TraesCS3B02G337700.1, TraesCS3D02G107500.1, TraesCS3D02G302900.1, TraesCS4A02G294400.1, TraesCS4A02G470500.1, TraesCS4B02G018900.2, TraesCS4D02G017500.1, TraesCS7D02G019000.1
Poaceae	Zea mays	3	Zm00001eb065420_P002, Zm00001eb121040_P001 ... Zm00001eb370160_P001
Poaceae	Zoysia japonica	7	nbis-gene-11812, nbis-gene-13337, nbis-gene-20590 ... nbis-gene-31181, nbis-gene-39456, nbis-gene-39457, nbis-gene-39459
Poaceae	Zoysia macrostachya	6	Zma_g11226, Zma_g3112, Zma_g7805, Zma_g792, Zma_g794 ... Zma_g8739
Portulacaceae	Portulaca oleracea	2	evm.TU.LG05.1529, evm.TU.LG07.1191
Posidoniaceae	Posidonia oceanica	2	gene.Posoc03g21400, gene.Posoc10g09380
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_4_RagTag.1823, evm.TU.Scaffold_4_RagTag.1825
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-25755
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-4245
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-4615
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000008l.1031
Rhizophoraceae	Kandelia obovata	1	Maker00000920
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-14853, nbisL1-mrna-14854
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-1122, nbisL1-mrna-1123
Salicaceae	Populus euphratica	5	populus_peu11921, populus_peu15006, populus_peu29049 ... populus_peu30443, populus_peu32664
Solanaceae	Lycium barbarum	3	gene-LOC132616465, gene-LOC132620290, gene-LOC132621418
Solanaceae	Solanum chilense	1	SOLCI001298000
Solanaceae	Solanum pennellii	3	gene-LOC107011476, gene-LOC107026249, gene-LOC107026404
Tamaricaceae	Reaumuria soongarica	1	gene_6528
Tamaricaceae	Tamarix chinensis	1	TC10G1776
Zosteraceae	Zostera marina	2	Zosma03g24130.v3.1, Zosma06g12380.v3.1