Basic Information
Locus ID:
Zosma03g23050.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 31235977 | 31237963 | + | Zosma03g23050.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 60,563.28 Da | 38.09 | 83.00 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 69 | 392 | 7.4E-70 | IPR000490 |
| Pfam | PF07983 | X8 domain | 410 | 483 | 9.5E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 69 | 392 | 7.23E-74 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 68 | 398 | 2.1E-102 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 403 | 515 | 6.9E-12 | - |
| SMART | SM00768 | X8_cls | 409 | 496 | 6.2E-45 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 304 | 317 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_016688203.1 | - | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9Q3M0 | Beta-1,3-endoglucanase, family GH17 OS=Zostera marina OX=29655 GN=ZOSMA_10G00420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology