Basic Information
Locus ID:
Zosma03g22750.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 31111027 | 31111709 | + | Zosma03g22750.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.42 | 15,694.17 Da | 36.23 | 68.39 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13499 | EF-hand domain pair | 1 | 58 | 1.1E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 68 | 130 | 3.4E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 1 | 129 | 1.59E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 65 | 1.3E-45 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 66 | 129 | 1.3E-45 | - |
| SMART | SM00054 | efh_1 | 104 | 132 | 8.3E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 69 | 97 | 0.019 | IPR002048 |
| SMART | SM00054 | efh_1 | 33 | 61 | 0.051 | IPR002048 |
| SMART | SM00054 | efh_1 | 1 | 25 | 0.5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 29 | 64 | 10.217514 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 100 | 135 | 14.318138 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 1 | 28 | 12.951263 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 65 | 99 | 11.277538 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 42 | 54 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 6 | 18 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 113 | 125 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21940.1 | calcium-dependent protein kinase 15. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_022876971.1 | - | 0 |
| P53683 | Calcium-dependent protein kinase 19 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9NRB3 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah033093, Ah036874 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl68967 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000004643, gene:ENSEOMG00000006606 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3BG0009830, CQ.Regalona.r1.7BG0018650 ... |
| Apiaceae | Apium graveolens | 2 | Ag2G01810, Ag8G00088 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1311.V1.1 |
| Brassicaceae | Brassica nigra | 2 | BniB01g043470.2N, BniB03g056960.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1650 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.915 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032026 |
| Poaceae | Echinochloa crus-galli | 1 | CH04.446 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G003830 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G027700 |
| Poaceae | Zea mays | 2 | Zm00001eb015740_P001, Zm00001eb168390_P001 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18442, nbisL1-mrna-18491 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5501 |
| Zosteraceae | Zostera marina | 1 | Zosma03g22750.v3.1 |