Basic Information
Locus ID:
Zosma03g22630.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 31063940 | 31070125 | + | Zosma03g22630.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 136,533.08 Da | 46.88 | 76.03 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 157 | 251 | 3.76605E-42 | - |
| CDD | cd13999 | STKc_MAP3K-like | 947 | 1201 | 2.03602E-105 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 943 | 1201 | 1.9E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 169 | 252 | 3.3E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 932 | 1201 | 2.08E-77 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 168 | 259 | 5.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1029 | 1217 | 6.8E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 934 | 1028 | 1.1E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 171 | 253 | 1.9E-11 | - |
| SMART | SM00220 | serkin_6 | 941 | 1203 | 8.4E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 167 | 253 | 7.3E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 941 | 1203 | 42.152546 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1065 | 1077 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 947 | 972 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1023 | 1036 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1059 | 1077 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1109 | 1119 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1172 | 1194 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1128 | 1150 | 1.4E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 445 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010923831.1 | uncharacterized protein LOC105046804 [Elaeis guineensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NTF6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology