Basic Information
Locus ID:
Zosma03g18400.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the leguminous lectin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 28282181 | 28301330 | - | Zosma03g18400.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 215,215.38 Da | 46.03 | 79.22 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1605 | 1882 | 6.69127E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 1599 | 1813 | 2.1E-49 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 1277 | 1500 | 1.0E-19 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1274 | 1500 | 2.31E-25 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1583 | 1906 | 6.2E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 1392 | 1557 | 2.3E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1676 | 1888 | 2.5E-61 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1257 | 1374 | 4.1E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1584 | 1675 | 1.8E-27 | - |
| SMART | SM00220 | serkin_6 | 1599 | 1879 | 3.3E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1599 | 1897 | 39.269211 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1723 | 1735 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1605 | 1628 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1050 | 1076 | - | - |
| Coils | Coil | Coil | 1048 | 1111 | - | - |
| Coils | Coil | Coil | 1115 | 1142 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_008798407.1 | probable L-type lectin-domain containing receptor kinase S.7 [Phoenix dactylifera] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q5W0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 3 | Zosma03g18400.v3.1, Zosma05g14710.v3.1, Zosma05g14720.v3.1 |