Basic Information
Locus ID:
Zosma03g17740.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 27616113 | 27632369 | - | Zosma03g17740.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 94,713.24 Da | 52.07 | 82.79 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 184 | 323 | 1.81624E-29 | - |
| CDD | cd00821 | PH | 24 | 123 | 7.81758E-12 | - |
| Pfam | PF00169 | PH domain | 23 | 127 | 5.5E-12 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 595 | 675 | 5.9E-21 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 184 | 328 | 8.8E-29 | IPR000198 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 184 | 377 | 4.91E-32 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 17 | 135 | 5.21E-18 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 11 | 129 | 2.8E-18 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 152 | 377 | 8.0E-39 | IPR008936 |
| SMART | SM00324 | RhoGAP_3 | 181 | 372 | 2.6E-22 | IPR000198 |
| SMART | SM00233 | PH_update | 22 | 130 | 6.8E-15 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 175 | 375 | 28.297211 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 21 | 128 | 15.231 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 740 | - | - |
| Coils | Coil | Coil | 775 | 802 | - | - |
| Coils | Coil | Coil | 585 | 619 | - | - |
| Coils | Coil | Coil | 651 | 671 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_010926988.1 | rho GTPase-activating protein 7 isoform X2 [Elaeis guineensis] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NLF4 | Rho GTPase-activating protein OS=Zostera marina OX=29655 GN=ZOSMA_8G00610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology