Basic Information
Locus ID:
Zosma03g15350.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 25603163 | 25605775 | - | Zosma03g15350.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 45,557.95 Da | 28.03 | 98.23 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 73 | 335 | 1.8E-116 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 338 | 391 | 8.63E-7 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 73 | 335 | 2.05E-54 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 100 | 400 | 1.9E-108 | IPR027417 |
| SMART | SM00382 | AAA_5 | 123 | 296 | 3.4E-8 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 70 | 390 | 1.3E-132 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 101 | 260 | 36.250744 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 264 | 340 | 25.727875 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 281 | 289 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 311 | 340 | 6.0E-73 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 364 | 381 | 6.0E-73 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 159 | 188 | 6.0E-73 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 278 | 306 | 6.0E-73 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 193 | 222 | 6.0E-73 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 231 | 260 | 6.0E-73 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 70 | 396 | 42.314377 | IPR013765 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_017218404.1 | PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like [Daucus carota subsp. sativus] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9NQH2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology