Basic Information
Locus ID:
Zosma03g08960.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 8852891 | 8853716 | - | Zosma03g08960.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 29,488.59 Da | 43.19 | 94.76 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 5 | 48 | 8.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 56 | 1.44E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 245 | 9.61E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 72 | 250 | 2.8E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 49 | 1.6E-9 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 48 | 11.617022 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042510140.1 | F-box protein SKIP19-like [Macadamia integrifolia] | 0 |
| TrEMBL | A0A0K9Q376 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 7 | Zosma03g00800.v3.1, Zosma03g05030.v3.1, Zosma03g05040.v3.1 ... |