Basic Information
Locus ID:
Zosma03g06350.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Sister chromatid cohesion protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 4577849 | 4591598 | + | Zosma03g06350.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 77,197.09 Da | 45.81 | 81.52 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 29 | 262 | 1.06E-8 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 473 | 519 | 5.01E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 474 | 522 | 1.0E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 616 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 572 | - | - |
| Coils | Coil | Coil | 393 | 413 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_038983833.1 | uncharacterized protein LOC103710418 [Phoenix dactylifera] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9NRB1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology