Basic Information
Locus ID:
Zosma03g04440.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 3065259 | 3067163 | + | Zosma03g04440.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 30,123.86 Da | 43.84 | 53.89 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 24 | 136 | 1.2E-20 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 141 | 189 | 1.0E-9 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 130 | 193 | 7.97E-20 | IPR011011 |
| SUPERFAMILY | SSF82061 | BAH domain | 9 | 127 | 3.66E-5 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 133 | 1.9E-27 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 203 | 9.4E-21 | IPR013083 |
| SMART | SM00439 | BAH_4 | 22 | 137 | 6.5E-34 | IPR001025 |
| SMART | SM00249 | PHD_3 | 141 | 188 | 2.2E-9 | IPR001965 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 22 | 137 | 22.028959 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 139 | 190 | 9.0984 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 142 | 187 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 237 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_010913441.1 | - | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NWL1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology