Basic Information
Locus ID:
Zosma03g03930.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 2749035 | 2751333 | - | Zosma03g03930.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 51,152.84 Da | 29.07 | 94.06 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 248 | 379 | 1.2E-13 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 233 | 380 | 2.09E-16 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 81 | 194 | 3.4E-15 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 220 | 380 | 5.0E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 73 | 205 | 2.1E-7 | IPR036378 |
| SMART | SM00554 | fasc_3 | 275 | 380 | 3.1E-13 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 75 | 223 | 8.729625 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 236 | 377 | 11.943115 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 437 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_008788906.4 | fasciclin-like arabinogalactan protein 2 [Phoenix dactylifera] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NXH8 | Fasciclin-like arabinogalactan protein 10 OS=Zostera marina OX=29655 GN=ZOSMA_52G01410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology