Basic Information
Locus ID:
Zosma02g23890.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 38941043 | 38942547 | - | Zosma02g23890.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 46,220.81 Da | 59.99 | 54.76 | -1.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 257 | 342 | 1.8E-14 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 359 | 390 | 9.4E-7 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 257 | 343 | 4.6E-14 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| Coils | Coil | Coil | 296 | 316 | - | - |
| Coils | Coil | Coil | 169 | 201 | - | - |
| Coils | Coil | Coil | 246 | 283 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06660.1 | PAPA-1-like family protein / zinc finger (HIT type) family protein. | 0 |
| RefSeq | XP_008235140.1 | - | 0 |
| TrEMBL | A0A0K9P112 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology