Basic Information
Locus ID:
Zosma02g23170.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 38674849 | 38678111 | + | Zosma02g23170.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 82,008.26 Da | 37.15 | 97.37 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 357 | 658 | 2.35876E-149 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 43 | 340 | 2.41188E-167 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 363 | 654 | 6.0E-32 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 356 | 658 | 7.06E-44 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 42 | 340 | 2.25E-40 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 41 | 341 | 1.0E-32 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 355 | 658 | 4.8E-46 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 43 | 341 | 31.674139 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 357 | 659 | 30.545444 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_008782908.2 | glycerophosphodiester phosphodiesterase GDPDL3-like [Phoenix dactylifera] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9PJI7 | glycerophosphodiester phosphodiesterase OS=Zostera marina OX=29655 GN=ZOSMA_221G00170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology