Basic Information
Locus ID:
Zosma02g21710.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 37957662 | 37959476 | - | Zosma02g21710.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 65,550.12 Da | 31.23 | 90.27 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 46 | 207 | 1.89298E-89 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 405 | 587 | 2.31935E-87 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 450 | 574 | 5.2E-16 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 43 | 211 | 4.2E-33 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 240 | 357 | 3.0E-19 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 405 | 599 | 8.94E-42 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 235 | 381 | 2.4E-29 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 43 | 219 | 1.09E-42 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 39 | 216 | 2.0E-57 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 399 | 586 | 3.2E-56 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 230 | 392 | 4.8E-39 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 38 | 599 | 2.8E-207 | IPR012110 |
| Coils | Coil | Coil | 177 | 197 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_034693900.1 | - | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9Q2F0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology