Basic Information
Locus ID:
Zosma02g21240.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 37697216 | 37698020 | + | Zosma02g21240.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 27,181.12 Da | 38.94 | 109.63 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 156 | 228 | 1.2E-12 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 2 | 148 | 8.9E-15 | IPR002524 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 3 | 149 | 3.27E-23 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 153 | 229 | 5.1E-16 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 1 | 147 | 4.3E-25 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 150 | 230 | 5.0E-18 | IPR036837 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_039129353.1 | - | 0 |
| Q5NA18 | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NKN8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology