Basic Information
Locus ID:
Zosma02g20430.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Potassium channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 37329379 | 37336556 | - | Zosma02g20430.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 107,688.81 Da | 42.00 | 87.26 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00038 | CAP_ED | 379 | 495 | 1.73143E-23 | IPR000595 |
| Pfam | PF06943 | LSD1 zinc finger | 596 | 620 | 1.9E-10 | IPR005735 |
| Pfam | PF00520 | Ion transport protein | 55 | 308 | 3.0E-25 | IPR005821 |
| Pfam | PF00656 | Caspase domain | 670 | 945 | 2.5E-61 | - |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 400 | 485 | 2.2E-13 | IPR000595 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 306 | 499 | 4.03E-38 | IPR018490 |
| SUPERFAMILY | SSF81324 | Voltage-gated potassium channels | 49 | 302 | 2.69E-36 | - |
| Gene3D | G3DSA:3.40.50.12660 | - | 651 | 957 | 4.6E-102 | - |
| Gene3D | G3DSA:1.10.287.630 | Helix hairpin bin | 306 | 367 | 4.1E-6 | - |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 368 | 505 | 1.2E-21 | IPR014710 |
| Gene3D | G3DSA:1.10.287.70 | - | 55 | 303 | 1.7E-29 | - |
| SMART | SM00100 | cnmp_10 | 379 | 501 | 1.4E-13 | IPR000595 |
| TIGRFAM | TIGR01053 | LSD1: zinc finger domain, LSD1 subclass | 593 | 623 | 2.2E-13 | IPR005735 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 379 | 486 | 20.496599 | IPR000595 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22200.2 | - | 0 |
| RefSeq | XP_029118293.1 | - | 0 |
| Q75HP9 | Potassium channel AKT2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0428700 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NP37 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology