Basic Information
Locus ID:
Zosma02g18700.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
NEP1-interacting protein-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 36176374 | 36176871 | + | Zosma02g18700.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 18,410.88 Da | 72.79 | 79.70 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 101 | 144 | 4.00642E-18 | - |
| Pfam | PF13639 | Ring finger domain | 101 | 144 | 9.9E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 101 | 152 | 4.71E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 149 | 1.7E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 102 | 143 | 1.0E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 102 | 144 | 12.725326 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47560.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010269643.1 | PREDICTED: RING-H2 finger protein ATL2 [Nelumbo nucifera] | 0 |
| O22255 | RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q2Y1 | RING-type domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_121G00310 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology