Basic Information
Locus ID:
Zosma02g15020.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
prefoldin subunit 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 32875329 | 32875784 | + | Zosma02g15020.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 16,793.11 Da | 53.20 | 93.64 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00584 | Prefoldin_alpha | 17 | 143 | 1.23066E-27 | - |
| Pfam | PF02996 | Prefoldin subunit | 31 | 143 | 1.5E-26 | IPR004127 |
| SUPERFAMILY | SSF46579 | Prefoldin | 16 | 147 | 8.11E-24 | - |
| Gene3D | G3DSA:1.10.287.370 | - | 8 | 150 | 1.2E-29 | IPR009053 |
| TIGRFAM | TIGR00293 | TIGR00293: prefoldin, alpha subunit | 17 | 144 | 9.3E-33 | IPR004127 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23290.1 | prefoldin 5. | 0 |
| RefSeq | NP_001305059.1 | probable prefoldin subunit 5 [Solanum lycopersicum] | 0 |
| P57742 | Prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=PFD5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PSC1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg7432 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25347 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah038580 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g202690 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14689, Sbi_jg55452 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26017 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012501 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl78056, Sgl80560 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015668, gene:ENSEOMG00000039031 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0000610, CQ.Regalona.r1.9AG0000720 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30225090 |
| Apiaceae | Apium graveolens | 1 | Ag5G01847 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G017290, COCNU_16G001180 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103712324, gene-LOC103722102 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G05503 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G23290.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10005074m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g23860.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g076520.2N, BniB07g040840.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0531 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl07G0553, Cgl07G0554 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g01790 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0907s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g21740 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9402 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2858 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00025347 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb7G33739, Lb7G33741, Lb7G33745 |
| Poaceae | Echinochloa crus-galli | 3 | BH01.2002, CH01.2114, Contig328.61 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0129040, gene-QOZ80_2BG0184190 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0045510.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_011622 |
| Poaceae | Oryza coarctata | 2 | Oco19G006640, Oco20G006630 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g34670.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G196900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0502672 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G012440, Chr09G011770, Chr13G013500, Chr15G016050 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G296000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG024960, gene_TRIDC1BG029850 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G163200.1, TraesCS1B02G179100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb045320_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-21101 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13429 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.1495, evm.TU.LG21.1168 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g09760 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_15_RagTag.470 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26648 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14169 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15867 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000001l.140, evm.TU.utg000001l.242 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002446 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13849 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2544 |
| Salicaceae | Populus euphratica | 2 | populus_peu13914, populus_peu23111 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132625395 |
| Solanaceae | Solanum chilense | 1 | SOLCI007435600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009018 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7427 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0880 |
| Zosteraceae | Zostera marina | 1 | Zosma02g15020.v3.1 |